I talked with BMC performance about this, and to my understanding there is a 12K mile engine warranty with VERY strict guidelines. The car still has to be covered under the original 36k mile warranty and the S/C warranty ends when you hit 36K miles or the 12K from them, whichever comes first.
Here is the deal...the actual head unit is warrantied for defects for 3 years/36k from the date of install. All periperal parts like brackets etc for 12 months.
However there is also an available drivetrain warranty...this is for 3 years/36,000 miles and covers the engine and trans up to 3000 for the motor and 2000 for the trans. Should there be any issues caused by the S/C. You need to run the tune that comes from Voretch and the standard 8 PSI pulley that comes from the kit. Also all work must be performed by a Top Tier Vortech installer, like BMCP
This is geared more for people who buy a brand new car and dont want to void the factory warranty...since it only apples from the in service date of the car.
Example:
You install the blower when you take delivery of the car...you have an option of a 3yr/36k drivetrain warranty from Vortech.
You install a blower after 1 year of ownership and 12,00 miles, you have an option of a drivetrain warranty that covers you the next 2 years and 24k miles and so on.
One other note...I installed the kit on my car when my car had 38,000 miles on the clock, and I now have 55k miles and have had no mechanical issues at all with the kit running the Vortech supplied tune.
Techco is also offering a similar warranty with their blowers for customers who have an authorized Techco installer like BMCP do the work. These are the only two blowers that offer this type of service.